2002-10-17 Determination of stoichiometric association constants by a non- iterative computational method. 351-357 1987 3 Computer Applications in the Biosciences 4 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics3.html#Laszlo87 2002-08-20 DIPLOMO: the tool for a new type of evolutionary analysis. 535-540 1995 11 Computer Applications in the Biosciences 5 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics11.html#WeillerG95 2003-11-25 Structure detection through automated covariance search. 365-371 1990 6 Computer Applications in the Biosciences 4 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics6.html#WinkerOWOP90 2002-08-15 An EXCEL template for calculation of enzyme kinetic parameters by non-linear regression. 227-228 1998 14 Bioinformatics 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics14.html#HernandezR98 2002-08-20 Using a measure of structural variation to define a core for the globins. 633-644 1995 11 Computer Applications in the Biosciences 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics11.html#GersteinA95 2002-11-08 Threading Using Neural nEtwork (TUNE): the measure of protein sequence-structure compatibility. 1350-1357 2002 18 Bioinformatics 10 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#LinMT02 2002-11-14 A set-theoretic approach to database searching and clustering. 430-438 1998 14 Bioinformatics 5 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics14.html#KrauseV98 2002-06-17 Distribution patterns of over-represented k-mers in non-coding yeast DNA. 513-528 2002 18 Bioinformatics 4 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#HampsonKB02 2002-09-16 Darwin v. 2.0: an interpreted computer language for the biosciences. 101-103 2000 16 Bioinformatics 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#GonnetHKB00 2002-08-19 RNAdraw: an integrated program for RNA secondary structure calculation and analysis under 32-bit Microsoft Windows. 247-249 1996 12 Computer Applications in the Biosciences 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics12.html#MatzuraW96 2002-12-19 A decomposition model to track gene expression signatures: preview on observer-independent classification of ovarian cancer. 1617-1624 2002 18 Bioinformatics 12 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#MartoglioMSM02 2002-11-14 Theoretical and experimental comparisons of gene expression indexes for oligonucleotide arrays. 1470-1476 2002 18 Bioinformatics 11 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#LemonPKW02 2003-04-30 Greedy mixture learning for multiple motif discovery in biological sequences. 607-617 2003 19 Bioinformatics 5 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#BlekasFL03 2002-06-17 Taxonomy workbench. 1179-1182 2001 17 Bioinformatics 12 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#WildpanerSSE01 2002-07-26 Browsing the SLoop database of structurally classified loops connecting elements of protein secondary structure. 513-519 2000 16 Bioinformatics 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#BurkeDB00 2003-06-23 Fast evaluation of internal loops in RNA secondary structure prediction. 440-445 1999 15 Bioinformatics 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics15.html#LyngsoZP99 2002-10-17 A microcomputer network for biochemistry. 3-5 1985 1 Computer Applications in the Biosciences 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics1.html#Peterson85 2003-03-31 Analysis of DNA curvature using artificial neural networks. 131-138 1998 14 Bioinformatics 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics14.html#ParbhaneTK98 2002-07-22 Picasso: generating a covering set of protein family profiles. 272-279 2001 17 Bioinformatics 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#HegerH01 2002-07-15 Adaptive algorithm of automated annotation. 838-844 2002 18 Bioinformatics 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#LeontovichBDN02 2002-10-17 A multiple alignment program for protein sequences. 111-114 1987 3 Computer Applications in the Biosciences 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics3.html#SantibanezR87 2002-06-19 Detecting the impact of sequencing errors on SAGE data. 840-842 2001 17 Bioinformatics 9 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#ColingeF01 2002-08-30 Scanning protein sequence databanks using a distributed processing workstation network. 85-88 1991 7 Computer Applications in the Biosciences 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics7.html#Barton91 2002-08-26 An efficient algorithm to locate all locally optimal alignments between two sequences allowing for gaps. 729-734 1993 9 Computer Applications in the Biosciences 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics9.html#Barton93 2002-08-15 CloneIt: finding cloning strategies, in-frame deletions and frameshifts. 465-466 1998 14 Bioinformatics 5 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics14.html#Lindenbaum98 2002-08-20 An image-processing approach to dotplots: an X-Window-based program for interactive analysis of dotplots derived from sequence and structural data. 301-308 1995 11 Computer Applications in the Biosciences 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics11.html#Trelles-SalazarZDCC95 2002-07-15 Conformational model for binding site recognition by the E.coli MetJ transcription factor. 622-633 2001 17 Bioinformatics 7 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#LiuBS01 2002-07-25 RCNPRED: prediction of the residue co-ordination numbers in proteins. 202-204 2001 17 Bioinformatics 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#FariselliC01a 2003-10-29 Diametrical clustering for identifying anti-correlated gene clusters. 1612-1619 2003 19 Bioinformatics 13 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#DhillonMR03 2002-07-25 Information theoretical probe selection for hybridisation experiments. 890-898 2000 16 Bioinformatics 10 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#HerwigSSOSMLR00 2002-08-21 Estimates for different stages of HIV/AIDS disease. 681-683 1994 10 Computer Applications in the Biosciences 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics10.html#WilsonS94 2003-04-30 Protein structure comparison by probability-based matching of secondary structure elements. 735-741 2003 19 Bioinformatics 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#ShihH03 2002-10-17 A microcomputer program for comparison and alignment of DNA sequence gel readings. 173-175 1985 1 Computer Applications in the Biosciences 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics1.html#Dardel85a 2002-09-06 DNAid: a Macintosh full screen editor featuring a built-in regular expression interpreter for the search of specific patterns in biological sequences using finite state automata. 483-486 1988 4 Computer Applications in the Biosciences 4 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics4.html#DardelB88 2003-04-30 Dynamic modeling of genetic networks using genetic algorithm and S-system. 643-650 2003 19 Bioinformatics 5 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#KikuchiTATT03 2002-10-17 Steady-state modelling of metabolic pathways: a guide for the prospective simulator. 5-11 1986 2 Computer Applications in the Biosciences 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics2.html#Hofmeyr86 2002-06-20 Structure prediction meta server. 750-751 2001 17 Bioinformatics 8 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#BujnickiEFR01 2002-08-20 A comprehensive representation of extensive similarity linkage between large numbers of proteins. 159-166 1995 11 Computer Applications in the Biosciences 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics11.html#WatanabeO95 2003-10-29 Designing hardware for protein sequence analysis. 1739-1740 2003 19 Bioinformatics 14 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#MarongiuPR03 2003-05-21 Generation of patterns from gene expression data by assigning confidence to differentially expressed genes. 685-698 2000 16 Bioinformatics 8 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#ManduchiGMOSSS00 2002-08-16 A key for freshwater invertebrates using fuzzy logic. 169-174 1997 13 Computer Applications in the Biosciences 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics13.html#WinderLS97 2003-03-18 A kinase sequence database: sequence alignments and family assignment. 1274-1275 2002 18 Bioinformatics 9 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#BuzkoS02 2002-07-15 A Java applet for visualizing protein-protein interaction. 669-671 2001 17 Bioinformatics 7 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#Mrowka01 2004-09-28 GenXref. VI: Automatic generation of links between two heterogeneous databases. 20-24 1998 14 Bioinformatics 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics14.html#AchardD98 2005-05-03 MACS: automatic counting of objects based on shape recognition. 563-564 1997 13 Computer Applications in the Biosciences 5 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics13.html#RollandBT97 2003-07-24 Comparison of microarray designs for class comparison and class discovery. 1438-1445 2002 18 Bioinformatics 11 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#DobbinS02 2002-06-17 PGAAS: a prokaryotic genome assembly assistant system. 661-665 2002 18 Bioinformatics 5 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#YuLZL02 2002-09-06 Version 5 of the Mount-Conrad-Myers Sequence Analysis Software Package now available. 211 1988 4 Computer Applications in the Biosciences 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics4.html#Williams88 2003-07-24 Modified Nonparametric Approaches to Detecting Differentially Expressed Genes in Replicated Microarray Experiments. 1046-1054 2003 19 Bioinformatics 9 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#ZhaoP03 2003-07-24 Alignment of BLAST High-scoring Segment Pairs Based on the Longest Increasing Subsequence Algorithm. 1391-1396 2003 19 Bioinformatics 11 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#Zhang03 2002-07-25 Support vector machine classification and validation of cancer tissue samples using microarray expression data. 906-914 2000 16 Bioinformatics 10 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#FureyCDBSH00 2006-04-27 The genetic data environment an expandable GUI for multiple sequence analysis. 671-675 1994 10 Computer Applications in the Biosciences 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics10.html#SmithOWGG94 2002-10-11 The use of structure information to increase alignment accuracy does not aid homologue detection with profile HMMs. 1243-1249 2002 18 Bioinformatics 9 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#Griffiths-JonesB02 2003-10-29 Simple stochastic birth andz death models of genome evolution: was there enough time for us to evolve? 1889-1900 2003 19 Bioinformatics 15 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#KarevWK03 2003-07-04 Evaluation of annotation strategies using an entire genome sequence. 717-726 2003 19 Bioinformatics 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#IliopoulosTAECPPLPPHTYTDBVBMLRSO03 2002-08-20 Detection of compositional constraints in nucleic acid sequences using neural networks. 29-37 1995 11 Computer Applications in the Biosciences 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics11.html#GranjeonT95 2002-11-14 ARROGANT: an application to manipulate large gene collections. 1410-1417 2002 18 Bioinformatics 11 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#KulkarniWLWMPG02 2002-08-05 A curriculum for bioinformatics: the time is ripe. 549-550 1998 14 Bioinformatics 7 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics14.html#Altman98 2002-07-16 Deriving quantitative conclusions from microarray expression data. 961-970 2002 18 Bioinformatics 7 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#OlshenJ02 2002-07-22 ProDDO: a database of disordered proteins from the Protein Data Bank (PDB). 379-380 2001 17 Bioinformatics 4 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#SimUM01 2002-09-06 A microcomputer program to evaluate the saturation of complex solutions with respect to biominerals. 373-379 1988 4 Computer Applications in the Biosciences 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics4.html#Shellis88 2002-10-18 Neural network input representations that produce accurate consensus sequences from DNA fragment assemblies. 723-728 1999 15 Bioinformatics 9 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics15.html#AllexSB99 2002-08-30 CONTROL: software for the analysis of the control of metabolic networks. 383-390 1991 7 Computer Applications in the Biosciences 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics7.html#LetellierRM91 2003-01-21 MAVG: locating non-overlapping maximum average segments in a given sequence. 151-152 2003 19 Bioinformatics 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#LinHJC03 2002-08-02 Combining many multiple alignments in one improved alignment. 122-130 1999 15 Bioinformatics 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics15.html#Bucka-LassenCH99 2002-08-19 Image library of biological macromolecules. 227-229 1996 12 Computer Applications in the Biosciences 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics12.html#Suhnel96 2003-06-27 Predicting potential domain homologies from FASTA search results. 371-372 1993 9 Computer Applications in the Biosciences 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics9.html#HegyiP93 2002-06-18 Concepts to automate the theoretical design of effective antisense oligonucleotides. 1058-1061 2001 17 Bioinformatics 11 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#FarNS01 2005-02-07 W2H: WWW interface to the GCG sequence analysis package. 452-457 1998 14 Bioinformatics 5 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics14.html#SengerFGEHS98 2002-07-29 ModBase: A database of comparative protein structure models. 1060-1061 1999 15 Bioinformatics 12 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics15.html#Sanchez99 2002-08-02 A novel method for automatic functional annotation of proteins. 228-233 1999 15 Bioinformatics 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics15.html#FleischmannMGA99 2003-07-24 Estimation of Transformation Parameters for Microarray Data. 1360-1367 2003 19 Bioinformatics 11 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#DurbinR03 2002-07-15 Technical comment to "Database verification studies of SWISS-PROT and GenBank" by Karp et al. 533-534 2001 17 Bioinformatics 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#ApweilerKJB01 2003-10-29 Building structural models of peptides: a semi-automatic software. 21-26 1991 7 Computer Applications in the Biosciences 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics7.html#MoranteP91 2004-06-21 Combinatorial image analysis of DNA microarray features. 194-203 2003 19 Bioinformatics 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#GlasbeyG03 2002-08-26 FISH: a guide to protein-coding DNA sequences in the GenBank database. 337-342 1993 9 Computer Applications in the Biosciences 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics9.html#Collins93 2002-12-19 OWEN: aligning long collinear regions of genomes. 1703-1704 2002 18 Bioinformatics 12 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#OgurtsovRSK02 2005-03-18 A simple approach for the distribution of computationally intense tasks in an heterogeneous environment: distribution of the MDPP image-processing package. 501-507 1991 7 Computer Applications in the Biosciences 4 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics7.html#SmithRBGD91 2005-06-07 A platform-independent graphical user interface for SEQSEE and XALIGN. 561-562 1997 13 Computer Applications in the Biosciences 5 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics13.html#WishartFWWRDSS97 2003-07-04 PBM: a software package to create, display and manipulate interactively models of small molecules and proteins on IBM-compatible PCs. 141-145 1995 11 Computer Applications in the Biosciences 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics11.html#PerrakisCAH95 2003-02-14 AVA: visual analysis of gene expression microarray data. 293-294 2003 19 Bioinformatics 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#ZhouL03 2003-08-21 JOY: protein sequence-structure representation and analysis. 617-623 1998 14 Bioinformatics 7 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics14.html#MizuguchiDBJO98 2002-07-29 A plant calmodulin-binding motor is part kinesin and part myosin. 1055-1057 1999 15 Bioinformatics 12 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics15.html#ReddyR99 2002-08-26 Algorithm and computer program Pro_Anal for analysis of relationship between structure and activity in a family of proteins or peptides. 491-497 1993 9 Computer Applications in the Biosciences 5 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics9.html#EroshkinZF93 2002-08-15 Bayesian adaptive sequence alignment algorithms. 25-39 1998 14 Bioinformatics 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics14.html#ZhuLL98 2002-08-21 Steady-state modelling of metabolic flux between the tricarboxylic acid cycle and the glyoxylate bypass in Escherichia coli. 295-299 1994 10 Computer Applications in the Biosciences 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics10.html#el-MansiDB94 2002-07-25 PANAL: an integrated resource for Protein sequence ANALysis. 1157-1158 2000 16 Bioinformatics 12 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#SilversteinKFJAR00 2002-11-08 MASIA: recognition of common patterns and properties in multiple aligned protein sequences. 950-951 2000 16 Bioinformatics 10 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#ZhuSB00 2002-09-04 On searching for the active sites in proteins and peptide hormones. 1-2 1990 6 Computer Applications in the Biosciences 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics6.html#GabrielianIK90 2002-06-19 Training for bioinformatics and computational biology. 761-762 2001 17 Bioinformatics 9 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#Pearson01 2002-08-15 Identifying distantly related protein sequences. 325-332 1997 13 Computer Applications in the Biosciences 4 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics13.html#Pearson97 2003-10-24 Analysis of gene evolution: the software AGE. 5-14 1992 8 Computer Applications in the Biosciences 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics8.html#ArquesMO92 2002-08-05 LIGAND: chemical database for enzyme reactions. 591-599 1998 14 Bioinformatics 7 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics14.html#GotoNK98 2002-08-05 PASSML: combining evolutionary inference and protein secondary structure prediction. 726-733 1998 14 Bioinformatics 8 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics14.html#LioGTJ98 2002-07-25 Extending the method of mathematically controlled comparison to include numerical comparisons. 786-798 2000 16 Bioinformatics 9 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#AlvesS00 2002-07-25 POWER_SAGE: comparing statistical tests for SAGE experiments. 953-959 2000 16 Bioinformatics 11 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#ManWW00 2002-10-17 Visualization of nucleic acid sequence structural information. 35-42 1985 1 Computer Applications in the Biosciences 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics1.html#Stuber85 2002-07-25 Genetic network inference: from co-expression clustering to reverse engineering. 707-726 2000 16 Bioinformatics 8 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#DhaeseleerLS00 2003-07-24 Fuzzy C-means Method for Clustering Microarray Data. 973-980 2003 19 Bioinformatics 8 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#DembeleK03 2002-07-26 Mathematica packages for simulation of experimental genetics. 408-410 2000 16 Bioinformatics 4 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#Manly00 2002-08-16 Prediction of Golgi Type II membrane proteins based on their transmembrane domains. 1109-1115 2002 18 Bioinformatics 8 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#YuanT02 2003-10-29 A comprehensive set of protein complexes in yeast: mining large scale protein-protein interaction screens. 1901-1908 2003 19 Bioinformatics 15 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#KrauseMB03 2002-06-17 ENDscript: a workflow to display sequence and structure information. 767-768 2002 18 Bioinformatics 5 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#GouetC02 2003-03-31 Analysis of transcription control signals using artificial neural networks. 293-300 1995 11 Computer Applications in the Biosciences 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics11.html#NairTK95 2002-11-08 U Subtle motifs: defining the limits of motif finding algorithms. 1382-1390 2002 18 Bioinformatics 10 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#KeichP02a 2002-07-25 Detection of a surface-exposed PEST like sequence in the metabotropic glutamate receptor mGluR1. 837-838 2000 16 Bioinformatics 9 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#Soloviev00 2002-08-30 Geobase: a simple geographical information system on a personal computer. 155-160 1991 7 Computer Applications in the Biosciences 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics7.html#BlaiseG91 2002-07-26 TrExML: a maximum-likelihood approach for extensive tree-space exploration. 383-394 2000 16 Bioinformatics 4 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#WolfEKMJ00 2002-07-15 Arrayplot for visualization and normalization of cDNA microarray data. 888-889 2002 18 Bioinformatics 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#MarcJ02 2003-11-03 FLUSYS: a software package for the collection and analysis of kinetic and scanning data from Perkin-Elmer fluorimeters. 118-119 1990 6 Computer Applications in the Biosciences 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics6.html#RawlingsB90 2003-01-21 MADGE: scalable distributed data management software for cDNA microarrays. 87-89 2003 19 Bioinformatics 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#McIndoeLH03 2003-01-21 Simulating complex traits influenced by genes with fuzzy-valued effects in pedigreed populations. 144-148 2003 19 Bioinformatics 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#CarleosRLB03 2002-10-17 Computer-based learning of cooperativity and allostery. 161-165 1985 1 Computer Applications in the Biosciences 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics1.html#FrancoC85 2002-07-25 A comparison of signal sequence prediction methods using a test set of signal peptides. 741-742 2000 16 Bioinformatics 8 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics16.html#MenneHA00 2002-07-15 SCORE: predicting the core of protein models. 541-550 2001 17 Bioinformatics 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#DeaneKB01 2003-07-01 A bank of protein family patterns for rapid identification of possible functions of amino acid sequences. 115-122 1997 13 Computer Applications in the Biosciences 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics13.html#BachinskyYGKN97 2002-08-21 A compression mechanism for sequence databases to improve the efficiency of conventional tools. 219-223 1995 11 Computer Applications in the Biosciences 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics11.html#DoelzE95 2002-08-05 Mapplet: a CORBA-based genome map viewer. 734-738 1998 14 Bioinformatics 8 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics14.html#JungferR98 2002-08-30 A Hypercard program for the identification of biological specimens [published erratum appears in Comput Appl Biosci 1991 Apr;7(2): 285]. 63-69 1991 7 Computer Applications in the Biosciences 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics7.html#ColosimoRO91 2002-10-11 Optimal enhancement of immune response. 1227-1235 2002 18 Bioinformatics 9 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#StengelGK02 2002-08-20 Prediction of zinc finger DNA binding protein. 125-131 1995 11 Computer Applications in the Biosciences 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics11.html#Nakata95 2006-09-04 Finding flexible patterns in a text: an application to three-dimensional molecular matching. 59-70 1995 11 Computer Applications in the Biosciences 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics11.html#SagotVPS95 2002-07-25 Gene recognition in eukaryotic DNA by comparison of genomic sequences. 1011-1018 2001 17 Bioinformatics 11 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#NovichkovGM01 2005-12-23 A proposal for a standard CORBA interface for genome maps. 157-169 1999 15 Bioinformatics 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics15.html#BarillotLLCJGVHR99 2002-06-18 Markovian domain fingerprinting: statistical segmentation of protein sequences. 927-934 2001 17 Bioinformatics 10 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#BejeranoSMT01 2003-08-21 Between-group analysis of microarray data. 1600-1608 2002 18 Bioinformatics 12 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#CulhanePCCH02 2002-09-04 Object-centered representation for species systematics and identification in living systems in nature. 383-386 1990 6 Computer Applications in the Biosciences 4 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics6.html#GautierP90 2002-07-22 STRAP: editor for STRuctural Alignments of Proteins. 377-378 2001 17 Bioinformatics 4 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#GilleF01 2002-10-17 Reducing the man-machine barrier: the Sequence Analysis Workbench. 229-232 1987 3 Computer Applications in the Biosciences 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics3.html#Bernstein87a 2003-01-21 Evolutionary algorithms for finding optimal gene sets in microarray prediction. 45-52 2003 19 Bioinformatics 1 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#Deutsch03 2002-10-18 SUBTRACT: a computer program for modeling the process of subtractive hydridization. 457-462 1995 11 Computer Applications in the Biosciences 4 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics11.html#ErmolaevaW95 2005-07-29 Can we recover a sequence, just knowing all its subsequences of given length? 569-574 1992 8 Computer Applications in the Biosciences 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics8.html#Guenoche92 2002-06-19 Comprehensive comparison between locations of orthologous genes on archaeal and bacterial genomes. 791-802 2001 17 Bioinformatics 9 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics17.html#HorimotoFM01 2002-06-11 A cluster validity framework for genome expression data. 319-320 2002 18 Bioinformatics 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#Azuaje02 2003-10-29 Automatic registration of microarray images. I. Rectangular grid. 1824-1831 2003 19 Bioinformatics 14 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#Galinsky03 2003-07-24 SATCHMO: Sequence Alignment and Tree Construction Using Hidden Markov Models. 1404-1411 2003 19 Bioinformatics 11 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#EdgarS03 2002-11-14 Empirical determination of effective gap penalties for sequence comparison. 1500-1507 2002 18 Bioinformatics 11 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics18.html#ReeseP02 2003-04-30 AFLPinSilico, simulating AFLP fingerprints. 776-777 2003 19 Bioinformatics 6 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics19.html#RombautsPR03 2003-11-03 Co-inertia analysis of amino-acid physico-chemical properties and protein composition with the ADE package. 321-329 1995 11 Computer Applications in the Biosciences 3 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics11.html#ThioulouseL95 2002-09-04 Mapping DNA by stochastic relaxation: a new approach to fragment sizes. 107-111 1990 6 Computer Applications in the Biosciences 2 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics6.html#GrigorjevM90 2002-08-26 Development of the Overlapping Oligonucleotide Database and its application to signal sequence search of the human genome. 427-434 1993 9 Computer Applications in the Biosciences 4 http://www.informatik.uni-trier.de/~ley/db/journals/bioinformatics/bioinformatics9.html#SakamotoTS93 2002-08-21 A simple tool to search for sequence motifs that are conserved in BLAST outputs. 457-459